Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CKS1BP61024 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 SNX18-202ENST00000343017 3140 ntBASIC12.01□□□□□ -0.49
CKS1BP61024 AL603756.1-201ENST00000606511 2163 ntBASIC12.01□□□□□ -0.49
CKS1BP61024 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CKS1BP61024 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CKS1BP61024 MESTP1-201ENST00000404287 994 ntBASIC12.01□□□□□ -0.49
CKS1BP61024 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.01□□□□□ -0.49
CKS1BP61024 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.01□□□□□ -0.49
CKS1BP61024 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
CKS1BP61024 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CKS1BP61024 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CKS1BP61024 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CKS1BP61024 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
CKS1BP61024 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CKS1BP61024 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CKS1BP61024 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
CKS1BP61024 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKS1BP61024 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CKS1BP61024 OR2I1P-210ENST00000642037 4691 ntBASIC12.01□□□□□ -0.49
CKS1BP61024 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.01□□□□□ -0.49
CKS1BP61024 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 AL355355.2-201ENST00000442321 338 ntBASIC12□□□□□ -0.49
CKS1BP61024 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12□□□□□ -0.49
CKS1BP61024 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12□□□□□ -0.49
CKS1BP61024 AC116562.2-201ENST00000507042 360 ntBASIC12□□□□□ -0.49
CKS1BP61024 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12□□□□□ -0.49
CKS1BP61024 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12□□□□□ -0.49
CKS1BP61024 MIR3180-4-201ENST00000582223 153 ntBASIC12□□□□□ -0.49
CKS1BP61024 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12□□□□□ -0.49
CKS1BP61024 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 AC112497.1-201ENST00000624824 639 ntBASIC12□□□□□ -0.49
CKS1BP61024 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CKS1BP61024 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12□□□□□ -0.49
CKS1BP61024 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS1BP61024 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS1BP61024 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS1BP61024 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CKS1BP61024 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms