Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SNORA78-201ENST00000459373 127 ntBASIC13.3□□□□□ -0.28
ERVFC1-1P60608 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 RARRES2P10-201ENST00000564312 460 ntBASIC13.3□□□□□ -0.28
ERVFC1-1P60608 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.3□□□□□ -0.28
ERVFC1-1P60608 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 KRT17P2-201ENST00000300992 1314 ntBASIC13.29□□□□□ -0.28
ERVFC1-1P60608 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ERVFC1-1P60608 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms