Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC009102.3-201ENST00000623118 1491 ntBASIC16.22■□□□□ 0.19
NR1H2P55055 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NR1H2P55055 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NR1H2P55055 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H2P55055 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.21■□□□□ 0.19
NR1H2P55055 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NR1H2P55055 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NR1H2P55055 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.21■□□□□ 0.19
NR1H2P55055 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.21■□□□□ 0.19
NR1H2P55055 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.21■□□□□ 0.19
NR1H2P55055 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.21■□□□□ 0.19
NR1H2P55055 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.21■□□□□ 0.19
NR1H2P55055 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.21■□□□□ 0.19
NR1H2P55055 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.21■□□□□ 0.19
NR1H2P55055 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.21■□□□□ 0.19
NR1H2P55055 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.21■□□□□ 0.19
NR1H2P55055 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.21■□□□□ 0.19
NR1H2P55055 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.21■□□□□ 0.19
NR1H2P55055 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NR1H2P55055 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NR1H2P55055 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.21■□□□□ 0.18
NR1H2P55055 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NR1H2P55055 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NR1H2P55055 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.2■□□□□ 0.18
NR1H2P55055 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.2■□□□□ 0.18
NR1H2P55055 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NR1H2P55055 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.2■□□□□ 0.18
NR1H2P55055 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.2■□□□□ 0.18
NR1H2P55055 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NR1H2P55055 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.2■□□□□ 0.18
NR1H2P55055 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.2■□□□□ 0.18
NR1H2P55055 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.2■□□□□ 0.18
NR1H2P55055 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H2P55055 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.19■□□□□ 0.18
NR1H2P55055 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 REXO1L11P-201ENST00000620964 1927 ntBASIC16.19■□□□□ 0.18
NR1H2P55055 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.19■□□□□ 0.18
NR1H2P55055 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 MIR149-201ENST00000384879 89 ntBASIC16.19■□□□□ 0.18
NR1H2P55055 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 DUSP5P1-201ENST00000441325 1139 ntBASIC16.19■□□□□ 0.18
NR1H2P55055 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms