Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.93■□□□□ 0.62
LBX1P52954 KRT8P22-201ENST00000562317 1415 ntBASIC18.93■□□□□ 0.62
LBX1P52954 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.93■□□□□ 0.62
LBX1P52954 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.93■□□□□ 0.62
LBX1P52954 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.93■□□□□ 0.62
LBX1P52954 MIR33B-201ENST00000385104 96 ntBASIC18.93■□□□□ 0.62
LBX1P52954 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.93■□□□□ 0.62
LBX1P52954 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.93■□□□□ 0.62
LBX1P52954 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.93■□□□□ 0.62
LBX1P52954 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.93■□□□□ 0.62
LBX1P52954 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.93■□□□□ 0.62
LBX1P52954 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.93■□□□□ 0.62
LBX1P52954 LINC00896-202ENST00000609602 2128 ntBASIC18.93■□□□□ 0.62
LBX1P52954 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LBX1P52954 AL096828.2-201ENST00000567259 1965 ntBASIC18.93■□□□□ 0.62
LBX1P52954 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LBX1P52954 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LBX1P52954 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.92■□□□□ 0.62
LBX1P52954 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.92■□□□□ 0.62
LBX1P52954 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.92■□□□□ 0.62
LBX1P52954 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.92■□□□□ 0.62
LBX1P52954 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.92■□□□□ 0.62
LBX1P52954 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.92■□□□□ 0.62
LBX1P52954 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LBX1P52954 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LBX1P52954 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.92■□□□□ 0.62
LBX1P52954 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LBX1P52954 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 AC114501.1-201ENST00000445949 172 ntBASIC18.91■□□□□ 0.62
LBX1P52954 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.91■□□□□ 0.62
LBX1P52954 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 AC025048.3-201ENST00000590609 569 ntBASIC18.91■□□□□ 0.62
LBX1P52954 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.91■□□□□ 0.62
LBX1P52954 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LBX1P52954 CU634019.7-201ENST00000624153 1185 ntBASIC18.91■□□□□ 0.62
LBX1P52954 FP236241.2-201ENST00000624906 1185 ntBASIC18.91■□□□□ 0.62
LBX1P52954 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.91■□□□□ 0.62
LBX1P52954 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
LBX1P52954 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.91■□□□□ 0.62
LBX1P52954 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.91■□□□□ 0.62
LBX1P52954 AL157384.1-201ENST00000445995 2473 ntBASIC18.91■□□□□ 0.62
LBX1P52954 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.91■□□□□ 0.62
LBX1P52954 AC126763.1-201ENST00000552015 2118 ntBASIC18.91■□□□□ 0.62
LBX1P52954 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LBX1P52954 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
LBX1P52954 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.9■□□□□ 0.62
LBX1P52954 AL607033.1-201ENST00000623900 1599 ntBASIC18.9■□□□□ 0.62
LBX1P52954 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.9■□□□□ 0.62
LBX1P52954 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.9■□□□□ 0.62
LBX1P52954 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LBX1P52954 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LBX1P52954 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms