Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6CP48668 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.56■□□□□ 0.24
KRT6CP48668 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.56■□□□□ 0.24
KRT6CP48668 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KRT6CP48668 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6CP48668 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.56■□□□□ 0.24
KRT6CP48668 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6CP48668 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KRT6CP48668 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
KRT6CP48668 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6CP48668 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6CP48668 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6CP48668 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KRT6CP48668 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6CP48668 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
KRT6CP48668 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6CP48668 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6CP48668 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6CP48668 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6CP48668 PCDHA14-201ENST00000506751 2298 ntBASIC16.56■□□□□ 0.24
KRT6CP48668 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 SIGLEC16-201ENST00000599858 1437 ntBASIC16.55■□□□□ 0.24
KRT6CP48668 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 TUBB8P12-201ENST00000308911 1335 ntBASIC16.55■□□□□ 0.24
KRT6CP48668 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 TUBB7P-202ENST00000428444 1305 ntBASIC16.55■□□□□ 0.24
KRT6CP48668 TUBB8P7-204ENST00000567960 1332 ntBASIC16.55■□□□□ 0.24
KRT6CP48668 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
KRT6CP48668 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 AP002490.2-201ENST00000524791 560 ntBASIC16.55■□□□□ 0.24
KRT6CP48668 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT6CP48668 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 MIR5100-201ENST00000579544 119 ntBASIC16.55■□□□□ 0.24
KRT6CP48668 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.55■□□□□ 0.24
KRT6CP48668 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 AC148477.5-201ENST00000625164 1645 ntBASIC16.55■□□□□ 0.24
KRT6CP48668 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT6CP48668 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
KRT6CP48668 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6CP48668 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT6CP48668 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT6CP48668 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT6CP48668 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
KRT6CP48668 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT6CP48668 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT6CP48668 NUS1P2-201ENST00000417358 873 ntBASIC16.54■□□□□ 0.24
KRT6CP48668 NUS1P1-201ENST00000446295 882 ntBASIC16.54■□□□□ 0.24
KRT6CP48668 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT6CP48668 AC092119.3-201ENST00000612618 583 ntBASIC16.54■□□□□ 0.24
KRT6CP48668 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.54■□□□□ 0.24
KRT6CP48668 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.54■□□□□ 0.24
KRT6CP48668 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6CP48668 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms