Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TM4SF4P48230 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TM4SF4P48230 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF4P48230 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.14■□□□□ 0.65
TM4SF4P48230 CROCCP4-201ENST00000457096 498 ntBASIC19.14■□□□□ 0.65
TM4SF4P48230 SERBP1P3-201ENST00000459980 809 ntBASIC19.14■□□□□ 0.65
TM4SF4P48230 SDHAP3-202ENST00000515467 728 ntBASIC19.14■□□□□ 0.65
TM4SF4P48230 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TM4SF4P48230 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF4P48230 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF4P48230 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 TMEM261P1-201ENST00000604899 340 ntBASIC19.14■□□□□ 0.65
TM4SF4P48230 AC093726.1-201ENST00000608064 963 ntBASIC19.14■□□□□ 0.65
TM4SF4P48230 WFDC1-204ENST00000613603 549 ntBASIC19.14■□□□□ 0.65
TM4SF4P48230 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.14■□□□□ 0.65
TM4SF4P48230 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.14■□□□□ 0.65
TM4SF4P48230 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TM4SF4P48230 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TM4SF4P48230 EGFEM1P-202ENST00000431685 1563 ntBASIC19.14■□□□□ 0.65
TM4SF4P48230 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF4P48230 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF4P48230 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.13■□□□□ 0.65
TM4SF4P48230 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF4P48230 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TM4SF4P48230 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TM4SF4P48230 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.13■□□□□ 0.65
TM4SF4P48230 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.13■□□□□ 0.65
TM4SF4P48230 AC015936.2-201ENST00000593177 259 ntBASIC19.13■□□□□ 0.65
TM4SF4P48230 AL033527.5-202ENST00000641632 1098 ntBASIC19.13■□□□□ 0.65
TM4SF4P48230 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TM4SF4P48230 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF4P48230 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF4P48230 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.13■□□□□ 0.65
TM4SF4P48230 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.12■□□□□ 0.65
TM4SF4P48230 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.12■□□□□ 0.65
TM4SF4P48230 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.12■□□□□ 0.65
TM4SF4P48230 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TM4SF4P48230 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TM4SF4P48230 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.12■□□□□ 0.65
TM4SF4P48230 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.12■□□□□ 0.65
TM4SF4P48230 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.12■□□□□ 0.65
TM4SF4P48230 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.12■□□□□ 0.65
TM4SF4P48230 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
TM4SF4P48230 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.12■□□□□ 0.65
TM4SF4P48230 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.12■□□□□ 0.65
TM4SF4P48230 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.12■□□□□ 0.65
TM4SF4P48230 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF4P48230 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.11■□□□□ 0.65
TM4SF4P48230 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF4P48230 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TM4SF4P48230 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 KRT8P12-202ENST00000472924 1397 ntBASIC19.11■□□□□ 0.65
TM4SF4P48230 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms