Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CKS2P33552 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.58□□□□□ -0.4
CKS2P33552 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS2P33552 SLC25A1P3-201ENST00000395415 828 ntBASIC12.58□□□□□ -0.4
CKS2P33552 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS2P33552 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.58□□□□□ -0.4
CKS2P33552 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.58□□□□□ -0.4
CKS2P33552 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS2P33552 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.58□□□□□ -0.4
CKS2P33552 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS2P33552 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.58□□□□□ -0.4
CKS2P33552 AC092850.2-201ENST00000623821 2697 ntBASIC12.58□□□□□ -0.4
CKS2P33552 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CKS2P33552 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CKS2P33552 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS2P33552 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.58□□□□□ -0.4
CKS2P33552 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS2P33552 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CKS2P33552 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CKS2P33552 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS2P33552 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS2P33552 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CKS2P33552 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.57□□□□□ -0.4
CKS2P33552 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.57□□□□□ -0.4
CKS2P33552 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CKS2P33552 AL353719.1-201ENST00000566847 864 ntBASIC12.57□□□□□ -0.4
CKS2P33552 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CKS2P33552 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 AC138969.2-201ENST00000532739 9932 ntBASIC12.57□□□□□ -0.4
CKS2P33552 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
CKS2P33552 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS2P33552 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CKS2P33552 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS2P33552 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CKS2P33552 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS2P33552 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CKS2P33552 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS2P33552 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS2P33552 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.56□□□□□ -0.4
CKS2P33552 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS2P33552 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms