Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PCDHB17P-201ENST00000539533 2393 ntBASIC15.84■□□□□ 0.13
PRKCAP17252 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.84■□□□□ 0.13
PRKCAP17252 AC106795.1-205ENST00000512851 1056 ntBASIC15.84■□□□□ 0.13
PRKCAP17252 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.84■□□□□ 0.13
PRKCAP17252 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 LINC01711-201ENST00000598340 967 ntBASIC15.84■□□□□ 0.13
PRKCAP17252 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.84■□□□□ 0.13
PRKCAP17252 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKCAP17252 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKCAP17252 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKCAP17252 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.83■□□□□ 0.13
PRKCAP17252 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKCAP17252 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKCAP17252 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKCAP17252 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKCAP17252 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.83■□□□□ 0.13
PRKCAP17252 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKCAP17252 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.83■□□□□ 0.13
PRKCAP17252 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKCAP17252 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRKCAP17252 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PRKCAP17252 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.83■□□□□ 0.13
PRKCAP17252 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PRKCAP17252 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PRKCAP17252 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PRKCAP17252 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.83■□□□□ 0.12
PRKCAP17252 RBM17P3-201ENST00000417687 1192 ntBASIC15.83■□□□□ 0.12
PRKCAP17252 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.83■□□□□ 0.12
PRKCAP17252 IFNL4P1-201ENST00000607083 540 ntBASIC15.83■□□□□ 0.12
PRKCAP17252 REXO1L6P-202ENST00000619970 1078 ntBASIC15.83■□□□□ 0.12
PRKCAP17252 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKCAP17252 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PRKCAP17252 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PRKCAP17252 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKCAP17252 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKCAP17252 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKCAP17252 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKCAP17252 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKCAP17252 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRKCAP17252 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms