Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.5■□□□□ 0.87
COL11A2P13942 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.5■□□□□ 0.87
COL11A2P13942 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL11A2P13942 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL11A2P13942 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 AC098614.1-201ENST00000368528 745 ntBASIC20.5■□□□□ 0.87
COL11A2P13942 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.5■□□□□ 0.87
COL11A2P13942 AC093004.1-201ENST00000508850 424 ntBASIC20.5■□□□□ 0.87
COL11A2P13942 SPTSSB-204ENST00000617024 1292 ntBASIC20.5■□□□□ 0.87
COL11A2P13942 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL11A2P13942 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL11A2P13942 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A2P13942 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
COL11A2P13942 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.49■□□□□ 0.87
COL11A2P13942 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.49■□□□□ 0.87
COL11A2P13942 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL11A2P13942 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL11A2P13942 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL11A2P13942 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL11A2P13942 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.49■□□□□ 0.87
COL11A2P13942 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.49■□□□□ 0.87
COL11A2P13942 AC044860.1-202ENST00000559481 777 ntBASIC20.49■□□□□ 0.87
COL11A2P13942 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.49■□□□□ 0.87
COL11A2P13942 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.49■□□□□ 0.87
COL11A2P13942 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL11A2P13942 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL11A2P13942 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL11A2P13942 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COL11A2P13942 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL11A2P13942 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
COL11A2P13942 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.48■□□□□ 0.87
COL11A2P13942 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.48■□□□□ 0.87
COL11A2P13942 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.48■□□□□ 0.87
COL11A2P13942 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.48■□□□□ 0.87
COL11A2P13942 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.48■□□□□ 0.87
COL11A2P13942 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.48■□□□□ 0.87
COL11A2P13942 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.48■□□□□ 0.87
COL11A2P13942 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL11A2P13942 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.48■□□□□ 0.87
COL11A2P13942 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.48■□□□□ 0.87
COL11A2P13942 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL11A2P13942 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL11A2P13942 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL11A2P13942 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COL11A2P13942 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL11A2P13942 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL11A2P13942 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
COL11A2P13942 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL11A2P13942 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.47■□□□□ 0.87
COL11A2P13942 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
COL11A2P13942 AL162274.1-201ENST00000617191 1098 ntBASIC20.47■□□□□ 0.87
COL11A2P13942 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.47■□□□□ 0.87
COL11A2P13942 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
COL11A2P13942 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.47■□□□□ 0.87
COL11A2P13942 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.47■□□□□ 0.87
COL11A2P13942 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.47■□□□□ 0.87
COL11A2P13942 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL11A2P13942 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.47■□□□□ 0.87
COL11A2P13942 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.47■□□□□ 0.87
COL11A2P13942 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL11A2P13942 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
COL11A2P13942 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.47■□□□□ 0.87
COL11A2P13942 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.47■□□□□ 0.87
COL11A2P13942 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.47■□□□□ 0.87
COL11A2P13942 AC008735.3-201ENST00000596646 500 ntBASIC20.47■□□□□ 0.87
COL11A2P13942 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.46■□□□□ 0.87
COL11A2P13942 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.46■□□□□ 0.87
COL11A2P13942 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 AC098850.1-201ENST00000419919 790 ntBASIC20.46■□□□□ 0.87
COL11A2P13942 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.46■□□□□ 0.87
COL11A2P13942 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL11A2P13942 KRT17P8-201ENST00000540749 863 ntBASIC20.46■□□□□ 0.87
COL11A2P13942 AC106886.1-201ENST00000568660 600 ntBASIC20.46■□□□□ 0.87
COL11A2P13942 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL11A2P13942 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL11A2P13942 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.45■□□□□ 0.87
COL11A2P13942 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms