Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.8□□□□□ -0.04
CSF1P09603 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSF1P09603 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSF1P09603 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CSF1P09603 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSF1P09603 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSF1P09603 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CSF1P09603 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSF1P09603 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSF1P09603 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSF1P09603 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 AL662844.4-201ENST00000606367 2838 ntBASIC14.79□□□□□ -0.04
CSF1P09603 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CSF1P09603 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CSF1P09603 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.79□□□□□ -0.04
CSF1P09603 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CSF1P09603 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.79□□□□□ -0.04
CSF1P09603 AC112907.2-201ENST00000448639 330 ntBASIC14.79□□□□□ -0.04
CSF1P09603 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CSF1P09603 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CSF1P09603 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.79□□□□□ -0.04
CSF1P09603 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.79□□□□□ -0.04
CSF1P09603 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
CSF1P09603 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.79□□□□□ -0.04
CSF1P09603 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.79□□□□□ -0.04
CSF1P09603 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CSF1P09603 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSF1P09603 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CSF1P09603 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.78□□□□□ -0.04
CSF1P09603 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSF1P09603 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.78□□□□□ -0.04
CSF1P09603 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
CSF1P09603 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.78□□□□□ -0.04
CSF1P09603 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.78□□□□□ -0.04
CSF1P09603 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.78□□□□□ -0.04
CSF1P09603 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.78□□□□□ -0.04
CSF1P09603 ZNF444P1-201ENST00000559497 298 ntBASIC14.78□□□□□ -0.04
CSF1P09603 AL136038.3-201ENST00000561909 1096 ntBASIC14.78□□□□□ -0.04
CSF1P09603 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.78□□□□□ -0.04
CSF1P09603 CLEC4GP1-201ENST00000596555 870 ntBASIC14.78□□□□□ -0.04
CSF1P09603 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.78□□□□□ -0.04
CSF1P09603 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.78□□□□□ -0.04
CSF1P09603 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSF1P09603 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CSF1P09603 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CSF1P09603 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.78□□□□□ -0.04
CSF1P09603 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CSF1P09603 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.78□□□□□ -0.04
CSF1P09603 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSF1P09603 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSF1P09603 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.77□□□□□ -0.04
CSF1P09603 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.77□□□□□ -0.04
CSF1P09603 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSF1P09603 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CSF1P09603 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSF1P09603 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSF1P09603 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSF1P09603 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms