Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
THBS1P07996 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
THBS1P07996 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
THBS1P07996 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 KRT8P49-201ENST00000604166 1432 ntBASIC15.68■□□□□ 0.1
THBS1P07996 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.68■□□□□ 0.1
THBS1P07996 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
THBS1P07996 AL645728.1-201ENST00000366221 2101 ntBASIC15.68■□□□□ 0.1
THBS1P07996 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.68■□□□□ 0.1
THBS1P07996 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
THBS1P07996 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 AL603756.1-201ENST00000606511 2163 ntBASIC15.68■□□□□ 0.1
THBS1P07996 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.68■□□□□ 0.1
THBS1P07996 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 AC120057.1-201ENST00000483947 663 ntBASIC15.68■□□□□ 0.1
THBS1P07996 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
THBS1P07996 KRT18P31-201ENST00000506277 1292 ntBASIC15.68■□□□□ 0.1
THBS1P07996 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.68■□□□□ 0.1
THBS1P07996 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 MTDHP3-201ENST00000594186 672 ntBASIC15.68■□□□□ 0.1
THBS1P07996 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.68■□□□□ 0.1
THBS1P07996 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
THBS1P07996 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
THBS1P07996 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.67■□□□□ 0.1
THBS1P07996 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
THBS1P07996 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.67■□□□□ 0.1
THBS1P07996 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
THBS1P07996 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
THBS1P07996 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.67■□□□□ 0.1
THBS1P07996 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.67■□□□□ 0.1
THBS1P07996 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
THBS1P07996 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
THBS1P07996 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.67■□□□□ 0.1
THBS1P07996 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.67■□□□□ 0.1
THBS1P07996 AC064862.7-201ENST00000604520 867 ntBASIC15.67■□□□□ 0.1
THBS1P07996 IFNL4P1-201ENST00000607083 540 ntBASIC15.67■□□□□ 0.1
THBS1P07996 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.67■□□□□ 0.1
THBS1P07996 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.67■□□□□ 0.1
THBS1P07996 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.67■□□□□ 0.1
THBS1P07996 AL391256.1-201ENST00000443260 1855 ntBASIC15.67■□□□□ 0.1
THBS1P07996 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.67■□□□□ 0.1
THBS1P07996 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
THBS1P07996 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
THBS1P07996 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.67■□□□□ 0.1
THBS1P07996 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.66■□□□□ 0.1
THBS1P07996 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
THBS1P07996 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THBS1P07996 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms