Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB4AP04350 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TUBB4AP04350 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB4AP04350 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB4AP04350 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB4AP04350 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB4AP04350 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBB4AP04350 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBB4AP04350 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB4AP04350 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB4AP04350 AC109462.3-201ENST00000573934 613 ntBASIC18.28■□□□□ 0.52
TUBB4AP04350 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.28■□□□□ 0.52
TUBB4AP04350 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB4AP04350 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TUBB4AP04350 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.28■□□□□ 0.52
TUBB4AP04350 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TUBB4AP04350 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TUBB4AP04350 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB4AP04350 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TUBB4AP04350 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TUBB4AP04350 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB4AP04350 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBB4AP04350 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB4AP04350 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBB4AP04350 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.27■□□□□ 0.52
TUBB4AP04350 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TUBB4AP04350 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBB4AP04350 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBB4AP04350 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBB4AP04350 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBB4AP04350 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.27■□□□□ 0.52
TUBB4AP04350 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.27■□□□□ 0.52
TUBB4AP04350 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TUBB4AP04350 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.27■□□□□ 0.52
TUBB4AP04350 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.27■□□□□ 0.52
TUBB4AP04350 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBB4AP04350 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.27■□□□□ 0.52
TUBB4AP04350 AL512604.3-201ENST00000569583 964 ntBASIC18.27■□□□□ 0.52
TUBB4AP04350 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBB4AP04350 AC004263.2-201ENST00000617183 678 ntBASIC18.27■□□□□ 0.52
TUBB4AP04350 AL139011.1-202ENST00000642063 584 ntBASIC18.27■□□□□ 0.52
TUBB4AP04350 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.27■□□□□ 0.52
TUBB4AP04350 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBB4AP04350 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TUBB4AP04350 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TUBB4AP04350 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB4AP04350 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.27■□□□□ 0.52
TUBB4AP04350 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB4AP04350 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB4AP04350 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB4AP04350 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
TUBB4AP04350 AP005117.1-202ENST00000581724 1908 ntBASIC18.27■□□□□ 0.51
TUBB4AP04350 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.27■□□□□ 0.51
TUBB4AP04350 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB4AP04350 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TUBB4AP04350 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB4AP04350 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBB4AP04350 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TUBB4AP04350 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBB4AP04350 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms