Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRGV3P03979 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRGV3P03979 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV3P03979 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV3P03979 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV3P03979 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRGV3P03979 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV3P03979 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV3P03979 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.43□□□□□ -0.26
TRGV3P03979 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRGV3P03979 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TRGV3P03979 AC108860.2-201ENST00000562760 2183 ntBASIC13.43□□□□□ -0.26
TRGV3P03979 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRGV3P03979 AL353135.1-201ENST00000606729 504 ntBASIC13.43□□□□□ -0.26
TRGV3P03979 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRGV3P03979 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
TRGV3P03979 AC004706.3-202ENST00000621574 984 ntBASIC13.43□□□□□ -0.26
TRGV3P03979 AC148477.8-201ENST00000624298 468 ntBASIC13.43□□□□□ -0.26
TRGV3P03979 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV3P03979 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
TRGV3P03979 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.42□□□□□ -0.26
TRGV3P03979 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV3P03979 MRPL3P1-201ENST00000400109 1033 ntBASIC13.42□□□□□ -0.26
TRGV3P03979 AL031284.1-201ENST00000419297 478 ntBASIC13.42□□□□□ -0.26
TRGV3P03979 HNRNPDP1-201ENST00000439535 754 ntBASIC13.42□□□□□ -0.26
TRGV3P03979 AC009078.2-202ENST00000463353 338 ntBASIC13.42□□□□□ -0.26
TRGV3P03979 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 AP001005.1-201ENST00000571755 1248 ntBASIC13.42□□□□□ -0.26
TRGV3P03979 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TRGV3P03979 AC008735.5-201ENST00000623544 497 ntBASIC13.42□□□□□ -0.26
TRGV3P03979 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV3P03979 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRGV3P03979 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TRGV3P03979 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV3P03979 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV3P03979 GPR89P-201ENST00000407924 1495 ntBASIC13.42□□□□□ -0.26
TRGV3P03979 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.41□□□□□ -0.26
TRGV3P03979 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRGV3P03979 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.41□□□□□ -0.26
TRGV3P03979 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 ELK2BP-201ENST00000415014 1224 ntBASIC13.41□□□□□ -0.26
TRGV3P03979 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms