Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPTM1O96005 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 AC073508.3-201ENST00000619697 1419 ntBASIC16.14■□□□□ 0.17
CLPTM1O96005 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPTM1O96005 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLPTM1O96005 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CLPTM1O96005 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLPTM1O96005 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPTM1O96005 FAM210CP-201ENST00000445714 574 ntBASIC16.14■□□□□ 0.17
CLPTM1O96005 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLPTM1O96005 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.14■□□□□ 0.17
CLPTM1O96005 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
CLPTM1O96005 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 AC022898.2-201ENST00000616822 1312 ntBASIC16.14■□□□□ 0.17
CLPTM1O96005 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CLPTM1O96005 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLPTM1O96005 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPTM1O96005 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1O96005 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.14■□□□□ 0.17
CLPTM1O96005 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLPTM1O96005 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 AL023284.2-201ENST00000405850 579 ntBASIC16.13■□□□□ 0.17
CLPTM1O96005 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.13■□□□□ 0.17
CLPTM1O96005 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 AC116407.2-201ENST00000613639 860 ntBASIC16.13■□□□□ 0.17
CLPTM1O96005 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 AC092053.1-201ENST00000605787 1936 ntBASIC16.13■□□□□ 0.17
CLPTM1O96005 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1O96005 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1O96005 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1O96005 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.12■□□□□ 0.17
CLPTM1O96005 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.12■□□□□ 0.17
CLPTM1O96005 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.12■□□□□ 0.17
CLPTM1O96005 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.12■□□□□ 0.17
CLPTM1O96005 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLPTM1O96005 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.12■□□□□ 0.17
CLPTM1O96005 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLPTM1O96005 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms