Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.03□□□□□ -0.16
SCAF4O95104 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 AC005052.1-201ENST00000625181 2492 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 CYP2T1P-202ENST00000641596 2535 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.03□□□□□ -0.16
SCAF4O95104 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.03□□□□□ -0.16
SCAF4O95104 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 AC117947.1-201ENST00000427448 529 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.03□□□□□ -0.16
SCAF4O95104 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.03□□□□□ -0.16
SCAF4O95104 SEC1P-202ENST00000473944 940 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 AC002558.1-201ENST00000488906 803 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.03□□□□□ -0.16
SCAF4O95104 AL049597.2-201ENST00000565575 961 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 AC024243.1-201ENST00000609234 778 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SCAF4O95104 AC006011.2-201ENST00000621313 1158 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.03□□□□□ -0.16
SCAF4O95104 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.03□□□□□ -0.16
SCAF4O95104 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 AL513523.2-202ENST00000427283 2040 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.03□□□□□ -0.16
SCAF4O95104 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.03□□□□□ -0.16
SCAF4O95104 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.03□□□□□ -0.16
SCAF4O95104 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.03□□□□□ -0.16
SCAF4O95104 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCAF4O95104 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SCAF4O95104 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SCAF4O95104 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 AC105917.1-201ENST00000506637 2539 ntBASIC14.02□□□□□ -0.16
SCAF4O95104 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SCAF4O95104 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.02□□□□□ -0.16
SCAF4O95104 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.02□□□□□ -0.16
SCAF4O95104 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.02□□□□□ -0.16
SCAF4O95104 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.02□□□□□ -0.16
SCAF4O95104 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCAF4O95104 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SCAF4O95104 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 MYCLP1-201ENST00000372451 1075 ntBASIC14.02□□□□□ -0.17
SCAF4O95104 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.02□□□□□ -0.17
SCAF4O95104 AC104076.2-201ENST00000448912 469 ntBASIC14.02□□□□□ -0.17
SCAF4O95104 AC092647.4-201ENST00000457211 535 ntBASIC14.02□□□□□ -0.17
SCAF4O95104 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.02□□□□□ -0.17
SCAF4O95104 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.02□□□□□ -0.17
SCAF4O95104 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.02□□□□□ -0.17
SCAF4O95104 YBX1P2-201ENST00000489612 999 ntBASIC14.02□□□□□ -0.17
SCAF4O95104 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.02□□□□□ -0.17
SCAF4O95104 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.02□□□□□ -0.17
SCAF4O95104 NEK4P2-201ENST00000580004 1012 ntBASIC14.02□□□□□ -0.17
SCAF4O95104 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.02□□□□□ -0.17
SCAF4O95104 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.02□□□□□ -0.17
SCAF4O95104 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.02□□□□□ -0.17
SCAF4O95104 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.02□□□□□ -0.17
SCAF4O95104 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SCAF4O95104 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SCAF4O95104 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCAF4O95104 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms