Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21■□□□□ 0.95
SMARCA5O60264 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SMARCA5O60264 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21■□□□□ 0.95
SMARCA5O60264 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21■□□□□ 0.95
SMARCA5O60264 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCA5O60264 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCA5O60264 PCDHA14-201ENST00000506751 2298 ntBASIC20.99■□□□□ 0.95
SMARCA5O60264 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCA5O60264 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SMARCA5O60264 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.99■□□□□ 0.95
SMARCA5O60264 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCA5O60264 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCA5O60264 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.99■□□□□ 0.95
SMARCA5O60264 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCA5O60264 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMARCA5O60264 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCA5O60264 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCA5O60264 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCA5O60264 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCA5O60264 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCA5O60264 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SMARCA5O60264 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCA5O60264 AL603756.1-201ENST00000606511 2163 ntBASIC20.98■□□□□ 0.95
SMARCA5O60264 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.98■□□□□ 0.95
SMARCA5O60264 AC098831.1-202ENST00000438821 336 ntBASIC20.98■□□□□ 0.95
SMARCA5O60264 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.98■□□□□ 0.95
SMARCA5O60264 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.98■□□□□ 0.95
SMARCA5O60264 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCA5O60264 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.98■□□□□ 0.95
SMARCA5O60264 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.98■□□□□ 0.95
SMARCA5O60264 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SMARCA5O60264 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMARCA5O60264 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMARCA5O60264 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMARCA5O60264 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCA5O60264 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SMARCA5O60264 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCA5O60264 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.97■□□□□ 0.95
SMARCA5O60264 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCA5O60264 AP001005.1-201ENST00000571755 1248 ntBASIC20.97■□□□□ 0.95
SMARCA5O60264 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCA5O60264 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCA5O60264 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCA5O60264 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCA5O60264 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCA5O60264 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCA5O60264 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCA5O60264 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms