Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 FAM8A3P-201ENST00000427218 844 ntBASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 AL009183.1-201ENST00000603760 355 ntBASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 AC009093.7-201ENST00000623853 1223 ntBASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3BA6NDS4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 HCG4-201ENST00000418983 998 ntBASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 KRT18P32-201ENST00000424695 1287 ntBASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 IGHV3-62-201ENST00000520057 340 ntBASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 AC134043.2-201ENST00000624206 2238 ntBASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3BA6NDS4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3BA6NDS4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms