Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.75□□□□□ -0.37
SMIM27A0A1W2PRY6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SMIM27A0A1W2PRY6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 KRT89P-201ENST00000620027 1478 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 CRYGFP-201ENST00000418459 633 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 AC096633.1-201ENST00000422446 749 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 AC116562.2-201ENST00000507042 360 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 RN7SL471P-201ENST00000580476 299 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 MIR3917-201ENST00000580971 93 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.74□□□□□ -0.37
SMIM27A0A1W2PRY6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 AC026271.2-201ENST00000428091 497 ntBASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 SLC25A1P2-201ENST00000430693 912 ntBASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 IGHV3-52-201ENST00000519770 353 ntBASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMIM27A0A1W2PRY6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM27A0A1W2PRY6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms