Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HLA-A-202ENST00000376806 1854 ntBASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 HBZP1-201ENST00000354915 429 ntBASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 KRT18P38-201ENST00000449496 1282 ntBASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 YBX1P2-201ENST00000489612 999 ntBASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 VENTXP5-201ENST00000523979 775 ntBASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 AC111152.3-201ENST00000569699 673 ntBASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 AL135999.2-201ENST00000622438 1686 ntBASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV5A0A0B4J249 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 AL391256.1-201ENST00000443260 1855 ntBASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 AL645728.1-201ENST00000366221 2101 ntBASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms