Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC003669.1-201ENST00000334569 611 ntBASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 KRT8P26-201ENST00000534154 1276 ntBASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC009533.2-201ENST00000543664 586 ntBASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 PAUPAR-201ENST00000630360 2965 ntBASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC099063.4-201ENST00000641099 1602 ntBASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 GPR89P-201ENST00000407924 1495 ntBASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 FRMD8P1-201ENST00000440433 1524 ntBASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL136038.3-201ENST00000561909 1096 ntBASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV6-7A0A0A0MS04 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
TRBV6-7A0A0A0MS04 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 AD001527.2-201ENST00000622994 785 ntBASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-7A0A0A0MS04 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms