Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC112698.1-201ENST00000510299 916 ntBASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGB1Q9Y5G3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 HMGA1P5-201ENST00000412453 271 ntBASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 AC002558.1-201ENST00000488906 803 ntBASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGB1Q9Y5G3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 TSPY12P-201ENST00000421279 868 ntBASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AC010203.1-204ENST00000548782 407 ntBASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 AC006538.1-201ENST00000567905 1585 ntBASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGB1Q9Y5G3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms