Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 AC124864.1-201ENST00000623408 392 ntBASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALCOCO1Q9P1Z2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CALCOCO1Q9P1Z2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 MTCL1P1-201ENST00000446207 792 ntBASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 FDX1P1-201ENST00000449115 551 ntBASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AP005901.3-202ENST00000581653 237 ntBASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AL732292.2-201ENST00000609649 430 ntBASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AC132872.4-202ENST00000622924 2756 ntBASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CALCOCO1Q9P1Z2 AC022188.1-201ENST00000620960 1664 ntBASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 TOB2P1-201ENST00000469761 992 ntBASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 AC112698.1-201ENST00000510299 916 ntBASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 AL353801.3-201ENST00000609898 542 ntBASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 IGHV3-41-201ENST00000613121 348 ntBASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALCOCO1Q9P1Z2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 KRT8P10-201ENST00000450021 1447 ntBASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 TSPY19P-201ENST00000418461 509 ntBASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 TSPY18P-201ENST00000441642 509 ntBASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 KRT17P6-201ENST00000453795 1220 ntBASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CALCOCO1Q9P1Z2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms