Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 AC129492.6-201ENST00000611383 1305 ntBASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK1Q9NYA1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SPHK1Q9NYA1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 RHOQP3-201ENST00000437982 621 ntBASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 AC124947.2-201ENST00000547118 1133 ntBASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 AC004877.2-201ENST00000623941 599 ntBASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK1Q9NYA1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 AC040169.1-201ENST00000565382 521 ntBASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK1Q9NYA1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 BCAR1-209ENST00000546196 1340 ntBASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms