Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 POM121L3P-201ENST00000419331 1163 ntBASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THUMPD1Q9NXG2 INTS4P1-201ENST00000438455 1935 ntBASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 AC092068.3-201ENST00000587894 2016 ntBASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 AC006449.5-201ENST00000610658 2098 ntBASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 ACTG1P4-201ENST00000425123 1122 ntBASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 KRT17P6-201ENST00000453795 1220 ntBASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 FER1L4-210ENST00000615531 5998 ntBASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
THUMPD1Q9NXG2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms