Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 AC003669.1-201ENST00000334569 611 ntBASIC15.93■□□□□ 0.14
RLIMQ9NVW2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 AC092329.2-201ENST00000598402 547 ntBASIC15.93■□□□□ 0.14
RLIMQ9NVW2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RLIMQ9NVW2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 PMPCAP1-201ENST00000508114 1576 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 OR6D1P-203ENST00000641209 4860 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 MIR1224-201ENST00000408193 85 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 ATP5G2P1-201ENST00000433580 426 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AC012615.1-201ENST00000565797 1299 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AC099336.1-202ENST00000602961 463 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AC114341.1-201ENST00000618070 349 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AC093458.2-201ENST00000623150 629 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AC148477.5-201ENST00000625164 1645 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 AC026691.1-201ENST00000602502 2017 ntBASIC15.92■□□□□ 0.14
RLIMQ9NVW2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RLIMQ9NVW2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 PCDHA1-201ENST00000378133 2726 ntBASIC15.91■□□□□ 0.14
RLIMQ9NVW2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 PCDHB17P-201ENST00000539533 2393 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms