Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 AC092053.1-201ENST00000605787 1936 ntBASIC14.78□□□□□ -0.04
IFT46Q9NQC8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.78□□□□□ -0.04
IFT46Q9NQC8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFT46Q9NQC8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 AC128688.1-201ENST00000487626 519 ntBASIC14.77□□□□□ -0.05
IFT46Q9NQC8 AC112698.1-201ENST00000510299 916 ntBASIC14.77□□□□□ -0.05
IFT46Q9NQC8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 AP000525.1-201ENST00000608286 694 ntBASIC14.77□□□□□ -0.05
IFT46Q9NQC8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 AC009154.2-201ENST00000621177 724 ntBASIC14.77□□□□□ -0.05
IFT46Q9NQC8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFT46Q9NQC8 AC026691.1-201ENST00000602502 2017 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 KRT89P-201ENST00000620027 1478 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 RNF216P1-203ENST00000404404 2427 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 TSPY12P-201ENST00000421279 868 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 AL390955.1-201ENST00000428694 934 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 UBE2SP1-201ENST00000450587 669 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 FITM1-202ENST00000559294 800 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 AC142381.4-202ENST00000563973 229 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 NEK4P2-201ENST00000580004 1012 ntBASIC14.76□□□□□ -0.05
IFT46Q9NQC8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.76□□□□□ -0.05
IFT46Q9NQC8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms