Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 SART3-203ENST00000546611 1184 ntBASIC16.31■□□□□ 0.2
BRF2Q9HAW0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 MTDHP4-201ENST00000600287 670 ntBASIC16.31■□□□□ 0.2
BRF2Q9HAW0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.31■□□□□ 0.2
BRF2Q9HAW0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRF2Q9HAW0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 AC004706.3-202ENST00000621574 984 ntBASIC16.3■□□□□ 0.2
BRF2Q9HAW0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
BRF2Q9HAW0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRF2Q9HAW0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms