Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AC046185.3-201ENST00000623228 1824 ntBASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 IGHV3-22-201ENST00000520721 359 ntBASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AC105339.3-201ENST00000560043 636 ntBASIC15.82■□□□□ 0.12
UBQLN3Q9H347 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AC006557.2-201ENST00000592985 1240 ntBASIC15.82■□□□□ 0.12
UBQLN3Q9H347 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 OR6D1P-203ENST00000641209 4860 ntBASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 LINC02012-201ENST00000608206 1725 ntBASIC15.82■□□□□ 0.12
UBQLN3Q9H347 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN3Q9H347 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 NCF1C-201ENST00000438382 1427 ntBASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 SLC25A1P1-201ENST00000528351 927 ntBASIC15.81■□□□□ 0.12
UBQLN3Q9H347 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms