Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS11Q9H270 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.2■□□□□ 0.34
VPS11Q9H270 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS11Q9H270 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS11Q9H270 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 EGFEM1P-202ENST00000431685 1563 ntBASIC17.19■□□□□ 0.34
VPS11Q9H270 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS11Q9H270 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VPS11Q9H270 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
VPS11Q9H270 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS11Q9H270 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.19■□□□□ 0.34
VPS11Q9H270 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
VPS11Q9H270 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
VPS11Q9H270 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 AC211429.1-201ENST00000415277 523 ntBASIC17.19■□□□□ 0.34
VPS11Q9H270 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.19■□□□□ 0.34
VPS11Q9H270 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS11Q9H270 STK25P1-201ENST00000585406 838 ntBASIC17.19■□□□□ 0.34
VPS11Q9H270 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS11Q9H270 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS11Q9H270 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
VPS11Q9H270 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS11Q9H270 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS11Q9H270 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS11Q9H270 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS11Q9H270 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS11Q9H270 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS11Q9H270 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS11Q9H270 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS11Q9H270 AL845331.1-201ENST00000424978 1190 ntBASIC17.18■□□□□ 0.34
VPS11Q9H270 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
VPS11Q9H270 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.18■□□□□ 0.34
VPS11Q9H270 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.18■□□□□ 0.34
VPS11Q9H270 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS11Q9H270 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS11Q9H270 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 AL662844.4-201ENST00000606367 2838 ntBASIC17.18■□□□□ 0.34
VPS11Q9H270 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS11Q9H270 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS11Q9H270 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VPS11Q9H270 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS11Q9H270 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS11Q9H270 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS11Q9H270 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS11Q9H270 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS11Q9H270 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
VPS11Q9H270 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS11Q9H270 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.17■□□□□ 0.34
VPS11Q9H270 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS11Q9H270 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms