Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YIPF4Q9BSR8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 AC124067.4-201ENST00000519691 2379 ntBASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 AC097637.2-201ENST00000624096 1997 ntBASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 FER1L4-210ENST00000615531 5998 ntBASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YIPF4Q9BSR8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
YIPF4Q9BSR8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.08■□□□□ 0.17
YIPF4Q9BSR8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
YIPF4Q9BSR8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
YIPF4Q9BSR8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
YIPF4Q9BSR8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
YIPF4Q9BSR8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 BX005266.1-201ENST00000473402 457 ntBASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 AP005117.1-201ENST00000584346 1413 ntBASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF4Q9BSR8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 AGGF1P2-201ENST00000426656 2106 ntBASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 RNF216P1-203ENST00000404404 2427 ntBASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 FLJ38576-201ENST00000623820 2459 ntBASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 TSPY19P-201ENST00000418461 509 ntBASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 TSPY18P-201ENST00000441642 509 ntBASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 FDX1P1-201ENST00000449115 551 ntBASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms