Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.06■□□□□ 0.32
CPNE1Q99829 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPNE1Q99829 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE1Q99829 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CPNE1Q99829 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE1Q99829 IER3-202ENST00000376377 1350 ntBASIC17.05■□□□□ 0.32
CPNE1Q99829 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 CYP2T1P-202ENST00000641596 2535 ntBASIC17.05■□□□□ 0.32
CPNE1Q99829 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE1Q99829 AC092329.2-201ENST00000598402 547 ntBASIC17.05■□□□□ 0.32
CPNE1Q99829 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE1Q99829 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE1Q99829 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CPNE1Q99829 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 AC004817.3-201ENST00000602957 2129 ntBASIC17.05■□□□□ 0.32
CPNE1Q99829 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CPNE1Q99829 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CPNE1Q99829 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE1Q99829 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE1Q99829 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE1Q99829 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CPNE1Q99829 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 AP002414.1-201ENST00000391405 1147 ntBASIC17.04■□□□□ 0.32
CPNE1Q99829 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE1Q99829 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE1Q99829 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.04■□□□□ 0.32
CPNE1Q99829 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.04■□□□□ 0.32
CPNE1Q99829 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.04■□□□□ 0.32
CPNE1Q99829 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.04■□□□□ 0.32
CPNE1Q99829 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.04■□□□□ 0.32
CPNE1Q99829 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 AC073592.4-201ENST00000623827 446 ntBASIC17.04■□□□□ 0.32
CPNE1Q99829 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE1Q99829 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CPNE1Q99829 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE1Q99829 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 PCDH8P1-201ENST00000428983 2773 ntBASIC17.03■□□□□ 0.32
CPNE1Q99829 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPNE1Q99829 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CPNE1Q99829 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE1Q99829 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CPNE1Q99829 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 LINC00982-205ENST00000420957 435 ntBASIC17.03■□□□□ 0.32
CPNE1Q99829 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 ABCD1P5-201ENST00000445663 754 ntBASIC17.03■□□□□ 0.32
CPNE1Q99829 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.03■□□□□ 0.32
CPNE1Q99829 AC104819.1-201ENST00000504587 486 ntBASIC17.03■□□□□ 0.32
CPNE1Q99829 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms