Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 AC009065.1-201ENST00000564055 1225 ntBASIC16.1■□□□□ 0.17
NR1H4Q96RI1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H4Q96RI1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 AL365209.1-201ENST00000624418 6473 ntBASIC16.09■□□□□ 0.17
NR1H4Q96RI1 AC023157.3-201ENST00000619086 2088 ntBASIC16.09■□□□□ 0.17
NR1H4Q96RI1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 CKBP1-201ENST00000565489 1086 ntBASIC16.09■□□□□ 0.17
NR1H4Q96RI1 AL139327.4-201ENST00000612362 153 ntBASIC16.09■□□□□ 0.17
NR1H4Q96RI1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NR1H4Q96RI1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.08■□□□□ 0.17
NR1H4Q96RI1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NR1H4Q96RI1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NR1H4Q96RI1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.08■□□□□ 0.17
NR1H4Q96RI1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 ESRRAP1-201ENST00000400596 1257 ntBASIC16.08■□□□□ 0.16
NR1H4Q96RI1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 KRT18P6-201ENST00000555540 1265 ntBASIC16.08■□□□□ 0.16
NR1H4Q96RI1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H4Q96RI1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.07■□□□□ 0.16
NR1H4Q96RI1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H4Q96RI1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms