Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RHBDF1Q96CC6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RHBDF1Q96CC6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 AL645728.1-201ENST00000366221 2101 ntBASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 AC025062.2-201ENST00000605477 670 ntBASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 AC004706.3-202ENST00000621574 984 ntBASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 PKD1P1-201ENST00000458669 6805 ntBASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RHBDF1Q96CC6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 UNC93B7-201ENST00000509439 705 ntBASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 AC021087.4-201ENST00000563761 564 ntBASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.59■□□□□ 0.25
RHBDF1Q96CC6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 PCDHB19P-201ENST00000570871 2371 ntBASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RHBDF1Q96CC6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHBDF1Q96CC6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHBDF1Q96CC6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RHBDF1Q96CC6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms