Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 AC080080.1-201ENST00000625121 2420 ntBASIC16.94■□□□□ 0.3
SH3KBP1Q96B97 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 LYSMD4-203ENST00000378904 2122 ntBASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SH3KBP1Q96B97 AC148477.5-201ENST00000625164 1645 ntBASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 AC073621.1-201ENST00000392730 636 ntBASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 AC034105.1-201ENST00000563488 319 ntBASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 AL139424.1-201ENST00000607572 797 ntBASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 AL023806.1-201ENST00000603994 1649 ntBASIC16.92■□□□□ 0.3
SH3KBP1Q96B97 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 MIR940-201ENST00000401276 94 ntBASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 MED15P5-201ENST00000423150 992 ntBASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 POLD2P1-201ENST00000511220 997 ntBASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms