Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 MINOS1P3-201ENST00000457048 203 ntBASIC19.26■□□□□ 0.67
SMARCE1Q969G3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 AC116407.4-201ENST00000623319 1061 ntBASIC19.26■□□□□ 0.67
SMARCE1Q969G3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCE1Q969G3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 INTS4P1-201ENST00000438455 1935 ntBASIC19.25■□□□□ 0.67
SMARCE1Q969G3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 AL603756.1-201ENST00000606511 2163 ntBASIC19.25■□□□□ 0.67
SMARCE1Q969G3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 DRAXINP1-201ENST00000437611 948 ntBASIC19.25■□□□□ 0.67
SMARCE1Q969G3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 TPSP2-201ENST00000561760 610 ntBASIC19.25■□□□□ 0.67
SMARCE1Q969G3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCE1Q969G3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 AC092171.3-201ENST00000610122 2651 ntBASIC19.24■□□□□ 0.67
SMARCE1Q969G3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 TOB2P1-201ENST00000469761 992 ntBASIC19.24■□□□□ 0.67
SMARCE1Q969G3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 AC096582.2-201ENST00000510860 516 ntBASIC19.24■□□□□ 0.67
SMARCE1Q969G3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCE1Q969G3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 AP002383.4-201ENST00000442518 975 ntBASIC19.23■□□□□ 0.67
SMARCE1Q969G3 KRT17P6-201ENST00000453795 1220 ntBASIC19.23■□□□□ 0.67
SMARCE1Q969G3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms