Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.31■□□□□ 0.52
SEMA4DQ92854 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SEMA4DQ92854 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
SEMA4DQ92854 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 TUBB8P12-201ENST00000308911 1335 ntBASIC18.3■□□□□ 0.52
SEMA4DQ92854 TUBB7P-202ENST00000428444 1305 ntBASIC18.3■□□□□ 0.52
SEMA4DQ92854 TUBB8P7-204ENST00000567960 1332 ntBASIC18.3■□□□□ 0.52
SEMA4DQ92854 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 AL662844.1-201ENST00000546340 181 ntBASIC18.3■□□□□ 0.52
SEMA4DQ92854 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 OR7E47P-204ENST00000575924 449 ntBASIC18.3■□□□□ 0.52
SEMA4DQ92854 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 KRT8P49-201ENST00000604166 1432 ntBASIC18.3■□□□□ 0.52
SEMA4DQ92854 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 AC084018.2-201ENST00000613093 2607 ntBASIC18.3■□□□□ 0.52
SEMA4DQ92854 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SEMA4DQ92854 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEMA4DQ92854 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 AC108073.2-201ENST00000464002 357 ntBASIC18.29■□□□□ 0.52
SEMA4DQ92854 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 AC107918.2-201ENST00000530817 355 ntBASIC18.29■□□□□ 0.52
SEMA4DQ92854 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 AC004790.2-201ENST00000623588 572 ntBASIC18.29■□□□□ 0.52
SEMA4DQ92854 AC005593.1-201ENST00000624894 515 ntBASIC18.29■□□□□ 0.52
SEMA4DQ92854 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.29■□□□□ 0.52
SEMA4DQ92854 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms