Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 TP73-AS1-210ENST00000637775 1455 ntBASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 PMPCAP1-201ENST00000508114 1576 ntBASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 HLA-J-202ENST00000469281 1241 ntBASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 VENTXP7-201ENST00000475503 772 ntBASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC44A1Q8WWI5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 AL049597.2-201ENST00000565575 961 ntBASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 MTHFR-217ENST00000641820 1569 ntBASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 AC148477.5-201ENST00000625164 1645 ntBASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 ME2P1-201ENST00000426028 1970 ntBASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC44A1Q8WWI5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms