Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA3Q8TBC4 AC005915.1-201ENST00000624912 2018 ntBASIC18.05■□□□□ 0.48
UBA3Q8TBC4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 DUX4L17-201ENST00000557360 1267 ntBASIC18.04■□□□□ 0.48
UBA3Q8TBC4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 BX640515.1-201ENST00000617215 977 ntBASIC18.04■□□□□ 0.48
UBA3Q8TBC4 GGTLC5P-201ENST00000617623 998 ntBASIC18.04■□□□□ 0.48
UBA3Q8TBC4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 AF228730.7-201ENST00000641842 219 ntBASIC18.04■□□□□ 0.48
UBA3Q8TBC4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 AC104109.2-201ENST00000602919 1418 ntBASIC18.04■□□□□ 0.48
UBA3Q8TBC4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
UBA3Q8TBC4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.03■□□□□ 0.48
UBA3Q8TBC4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBA3Q8TBC4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms