Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
VPS52Q8N1B4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 NFIC-211ENST00000641145 8399 ntBASIC18.52■□□□□ 0.55
VPS52Q8N1B4 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
VPS52Q8N1B4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 AC012317.2-201ENST00000623305 2251 ntBASIC18.51■□□□□ 0.55
VPS52Q8N1B4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS52Q8N1B4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 AC099398.1-201ENST00000567919 2776 ntBASIC18.5■□□□□ 0.55
VPS52Q8N1B4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 FAM58CP-201ENST00000435741 640 ntBASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 AC074386.1-202ENST00000463561 864 ntBASIC18.5■□□□□ 0.55
VPS52Q8N1B4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 AC023141.13-201ENST00000604991 943 ntBASIC18.5■□□□□ 0.55
VPS52Q8N1B4 AC007064.4-201ENST00000637740 555 ntBASIC18.5■□□□□ 0.55
VPS52Q8N1B4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS52Q8N1B4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS52Q8N1B4 AL645939.2-201ENST00000427340 991 ntBASIC18.49■□□□□ 0.55
VPS52Q8N1B4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms