Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 LINC00304-203ENST00000565008 1864 ntBASIC21.12■□□□□ 0.97
COL23A1Q86Y22 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 FAM8A2P-201ENST00000528813 1142 ntBASIC21.12■□□□□ 0.97
COL23A1Q86Y22 AC044860.1-202ENST00000559481 777 ntBASIC21.12■□□□□ 0.97
COL23A1Q86Y22 MIR4538-201ENST00000581377 78 ntBASIC21.12■□□□□ 0.97
COL23A1Q86Y22 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 COX11-210ENST00000639671 696 ntBASIC21.12■□□□□ 0.97
COL23A1Q86Y22 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL23A1Q86Y22 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 AL512361.1-201ENST00000554200 418 ntBASIC21.11■□□□□ 0.97
COL23A1Q86Y22 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 AC099568.2-201ENST00000609194 695 ntBASIC21.11■□□□□ 0.97
COL23A1Q86Y22 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.11■□□□□ 0.97
COL23A1Q86Y22 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL23A1Q86Y22 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 CTBP2P3-201ENST00000585629 1255 ntBASIC21.1■□□□□ 0.97
COL23A1Q86Y22 CYP2A7P1-201ENST00000595391 815 ntBASIC21.1■□□□□ 0.97
COL23A1Q86Y22 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL23A1Q86Y22 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 AL133338.1-201ENST00000565695 1517 ntBASIC21.09■□□□□ 0.97
COL23A1Q86Y22 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.09■□□□□ 0.97
COL23A1Q86Y22 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms