Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.96□□□□□ -0.02
C11orf88Q6PI97 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 HLA-J-201ENST00000462773 1622 ntBASIC14.95□□□□□ -0.02
C11orf88Q6PI97 LINC01126-201ENST00000623515 1646 ntBASIC14.95□□□□□ -0.02
C11orf88Q6PI97 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 AL023284.2-201ENST00000405850 579 ntBASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 DUTP2-201ENST00000519164 463 ntBASIC14.95□□□□□ -0.02
C11orf88Q6PI97 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 MIR4674-201ENST00000582457 87 ntBASIC14.95□□□□□ -0.02
C11orf88Q6PI97 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 AL358472.4-201ENST00000633140 710 ntBASIC14.95□□□□□ -0.02
C11orf88Q6PI97 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.95□□□□□ -0.02
C11orf88Q6PI97 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C11orf88Q6PI97 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.94□□□□□ -0.02
C11orf88Q6PI97 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 KRT8P7-201ENST00000533003 1432 ntBASIC14.94□□□□□ -0.02
C11orf88Q6PI97 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 AL671277.2-201ENST00000458060 996 ntBASIC14.94□□□□□ -0.02
C11orf88Q6PI97 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms