Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 AC008667.4-201ENST00000607370 168 ntBASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 AL805961.1-202ENST00000641562 540 ntBASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
RFWD3Q6PCD5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 MED15P5-201ENST00000423150 992 ntBASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 IGHV3-65-201ENST00000523210 341 ntBASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 TERC-201ENST00000602385 541 ntBASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 AC027601.4-201ENST00000611259 610 ntBASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 AC004790.2-201ENST00000623588 572 ntBASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD3Q6PCD5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD3Q6PCD5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms