Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 FGFR3P6-201ENST00000457012 610 ntBASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 AC139887.3-201ENST00000568585 713 ntBASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST2H2AA3Q6FI13 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 FRMD8P1-201ENST00000440433 1524 ntBASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 MTDHP4-201ENST00000600287 670 ntBASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 AC064862.7-201ENST00000604520 867 ntBASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 AL353135.1-201ENST00000606729 504 ntBASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 IFNL4P1-201ENST00000607083 540 ntBASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 AC012313.10-201ENST00000623509 926 ntBASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HIST2H2AA3Q6FI13 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 PKD1P5-201ENST00000532415 10291 ntBASIC16.49■□□□□ 0.23
HIST2H2AA3Q6FI13 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 TUBB8P12-201ENST00000308911 1335 ntBASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 TUBB7P-202ENST00000428444 1305 ntBASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 TUBB8P7-204ENST00000567960 1332 ntBASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 PCDHA12-202ENST00000613593 2588 ntBASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
HIST2H2AA3Q6FI13 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms