Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 TSPY19P-201ENST00000418461 509 ntBASIC16.28■□□□□ 0.2
SPIN4Q56A73 TSPY18P-201ENST00000441642 509 ntBASIC16.28■□□□□ 0.2
SPIN4Q56A73 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 DUX4L17-201ENST00000557360 1267 ntBASIC16.28■□□□□ 0.2
SPIN4Q56A73 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 AC091304.2-201ENST00000564639 760 ntBASIC16.28■□□□□ 0.2
SPIN4Q56A73 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.28■□□□□ 0.2
SPIN4Q56A73 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPIN4Q56A73 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AC243591.1-201ENST00000452967 1364 ntBASIC16.27■□□□□ 0.2
SPIN4Q56A73 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.27■□□□□ 0.2
SPIN4Q56A73 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPIN4Q56A73 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPIN4Q56A73 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SPIN4Q56A73 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPIN4Q56A73 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPIN4Q56A73 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPIN4Q56A73 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPIN4Q56A73 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.27■□□□□ 0.19
SPIN4Q56A73 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SPIN4Q56A73 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPIN4Q56A73 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.26■□□□□ 0.19
SPIN4Q56A73 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
SPIN4Q56A73 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.26■□□□□ 0.19
SPIN4Q56A73 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SPIN4Q56A73 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPIN4Q56A73 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms