Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CERKLQ49MI3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.85■□□□□ 0.77
CERKLQ49MI3 MPDU1-223ENST00000582151 728 ntBASIC19.85■□□□□ 0.77
CERKLQ49MI3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CERKLQ49MI3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CERKLQ49MI3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CERKLQ49MI3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CERKLQ49MI3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CERKLQ49MI3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CERKLQ49MI3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CERKLQ49MI3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CERKLQ49MI3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.85■□□□□ 0.77
CERKLQ49MI3 AC068880.1-201ENST00000507289 2297 ntBASIC19.85■□□□□ 0.77
CERKLQ49MI3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 AL021920.2-201ENST00000624828 1351 ntBASIC19.84■□□□□ 0.77
CERKLQ49MI3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 RNU1-129P-201ENST00000384064 167 ntBASIC19.84■□□□□ 0.77
CERKLQ49MI3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 U1.21-201ENST00000580816 167 ntBASIC19.84■□□□□ 0.77
CERKLQ49MI3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 CROCCP2-202ENST00000412962 2773 ntBASIC19.84■□□□□ 0.77
CERKLQ49MI3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 AC131009.4-201ENST00000624048 1740 ntBASIC19.84■□□□□ 0.77
CERKLQ49MI3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 KRT8P49-201ENST00000604166 1432 ntBASIC19.84■□□□□ 0.77
CERKLQ49MI3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CERKLQ49MI3 AC067852.2-201ENST00000590513 2313 ntBASIC19.84■□□□□ 0.77
CERKLQ49MI3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CERKLQ49MI3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.83■□□□□ 0.77
CERKLQ49MI3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.83■□□□□ 0.77
CERKLQ49MI3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.83■□□□□ 0.77
CERKLQ49MI3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.83■□□□□ 0.77
CERKLQ49MI3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CERKLQ49MI3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.83■□□□□ 0.77
CERKLQ49MI3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.83■□□□□ 0.77
CERKLQ49MI3 AL031055.1-201ENST00000606362 631 ntBASIC19.83■□□□□ 0.77
CERKLQ49MI3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CERKLQ49MI3 AP001350.2-201ENST00000625104 1094 ntBASIC19.83■□□□□ 0.77
CERKLQ49MI3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.83■□□□□ 0.76
CERKLQ49MI3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.83■□□□□ 0.76
CERKLQ49MI3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CERKLQ49MI3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CERKLQ49MI3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CERKLQ49MI3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CERKLQ49MI3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.83■□□□□ 0.76
CERKLQ49MI3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.83■□□□□ 0.76
CERKLQ49MI3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CERKLQ49MI3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.82■□□□□ 0.76
CERKLQ49MI3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.82■□□□□ 0.76
CERKLQ49MI3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.82■□□□□ 0.76
CERKLQ49MI3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CERKLQ49MI3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.82■□□□□ 0.76
CERKLQ49MI3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CERKLQ49MI3 MIR770-201ENST00000390219 98 ntBASIC19.82■□□□□ 0.76
CERKLQ49MI3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.82■□□□□ 0.76
CERKLQ49MI3 FAM58DP-201ENST00000428076 619 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms