Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM71Q2Q1W2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 IGHV3-42-201ENST00000520410 361 ntBASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 AC131009.4-201ENST00000624048 1740 ntBASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM71Q2Q1W2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM71Q2Q1W2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM71Q2Q1W2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM71Q2Q1W2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
TRIM71Q2Q1W2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 AC142381.1-201ENST00000426099 345 ntBASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 MIR4492-201ENST00000581627 80 ntBASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 MIR4453-201ENST00000584019 89 ntBASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 AL035252.4-201ENST00000624174 288 ntBASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 AC093525.9-201ENST00000624961 1746 ntBASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM71Q2Q1W2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 AC016396.2-201ENST00000562575 1417 ntBASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms