Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP1Q04837 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP1Q04837 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP1Q04837 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 AC079328.2-201ENST00000561241 3354 ntBASIC14.45□□□□□ -0.1
SSBP1Q04837 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.45□□□□□ -0.1
SSBP1Q04837 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.45□□□□□ -0.1
SSBP1Q04837 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SSBP1Q04837 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SSBP1Q04837 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.45□□□□□ -0.1
SSBP1Q04837 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 AL603832.2-201ENST00000566195 2125 ntBASIC14.45□□□□□ -0.1
SSBP1Q04837 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 AL596087.1-201ENST00000400979 1969 ntBASIC14.45□□□□□ -0.1
SSBP1Q04837 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SSBP1Q04837 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 AL135999.2-201ENST00000622438 1686 ntBASIC14.45□□□□□ -0.1
SSBP1Q04837 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.45□□□□□ -0.1
SSBP1Q04837 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSBP1Q04837 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SSBP1Q04837 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SSBP1Q04837 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.44□□□□□ -0.1
SSBP1Q04837 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
SSBP1Q04837 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.44□□□□□ -0.1
SSBP1Q04837 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.44□□□□□ -0.1
SSBP1Q04837 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SSBP1Q04837 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSBP1Q04837 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.44□□□□□ -0.1
SSBP1Q04837 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SSBP1Q04837 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SSBP1Q04837 IGHGP-201ENST00000390555 1178 ntBASIC14.44□□□□□ -0.1
SSBP1Q04837 HMGA1P5-201ENST00000412453 271 ntBASIC14.44□□□□□ -0.1
SSBP1Q04837 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP1Q04837 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.44□□□□□ -0.1
SSBP1Q04837 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.44□□□□□ -0.1
SSBP1Q04837 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.44□□□□□ -0.1
SSBP1Q04837 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.44□□□□□ -0.1
SSBP1Q04837 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.44□□□□□ -0.1
SSBP1Q04837 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.44□□□□□ -0.1
SSBP1Q04837 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP1Q04837 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms