Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.84■□□□□ 0.45
CBX1P83916 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 LINC01311-201ENST00000565162 1445 ntBASIC17.84■□□□□ 0.45
CBX1P83916 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.84■□□□□ 0.45
CBX1P83916 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.84■□□□□ 0.45
CBX1P83916 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.84■□□□□ 0.45
CBX1P83916 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.84■□□□□ 0.45
CBX1P83916 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.84■□□□□ 0.45
CBX1P83916 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CBX1P83916 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.84■□□□□ 0.45
CBX1P83916 ME2P1-201ENST00000426028 1970 ntBASIC17.84■□□□□ 0.45
CBX1P83916 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.84■□□□□ 0.45
CBX1P83916 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.84■□□□□ 0.45
CBX1P83916 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CBX1P83916 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.83■□□□□ 0.45
CBX1P83916 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.83■□□□□ 0.45
CBX1P83916 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX1P83916 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX1P83916 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CBX1P83916 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.83■□□□□ 0.45
CBX1P83916 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX1P83916 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.83■□□□□ 0.44
CBX1P83916 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.83■□□□□ 0.44
CBX1P83916 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.83■□□□□ 0.44
CBX1P83916 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 OR2I1P-210ENST00000642037 4691 ntBASIC17.83■□□□□ 0.44
CBX1P83916 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CBX1P83916 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CBX1P83916 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX1P83916 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.82■□□□□ 0.44
CBX1P83916 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.82■□□□□ 0.44
CBX1P83916 AC005829.2-201ENST00000571422 1056 ntBASIC17.82■□□□□ 0.44
CBX1P83916 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CBX1P83916 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CBX1P83916 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 AC010327.5-201ENST00000586923 3061 ntBASIC17.82■□□□□ 0.44
CBX1P83916 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.82■□□□□ 0.44
CBX1P83916 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CBX1P83916 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX1P83916 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX1P83916 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX1P83916 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CBX1P83916 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.81■□□□□ 0.44
CBX1P83916 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX1P83916 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CBX1P83916 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CBX1P83916 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms