Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN6P56747 AL645728.2-201ENST00000641974 660 ntBASIC16.34■□□□□ 0.21
CLDN6P56747 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 AC005332.8-201ENST00000622750 2735 ntBASIC16.34■□□□□ 0.21
CLDN6P56747 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN6P56747 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN6P56747 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN6P56747 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN6P56747 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CLDN6P56747 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN6P56747 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN6P56747 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CLDN6P56747 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN6P56747 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.33■□□□□ 0.21
CLDN6P56747 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN6P56747 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.33■□□□□ 0.21
CLDN6P56747 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 GAPDHP21-201ENST00000450301 1010 ntBASIC16.33■□□□□ 0.2
CLDN6P56747 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN6P56747 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN6P56747 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN6P56747 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN6P56747 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.33■□□□□ 0.2
CLDN6P56747 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN6P56747 MIR6080-201ENST00000617359 66 ntBASIC16.33■□□□□ 0.2
CLDN6P56747 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.33■□□□□ 0.2
CLDN6P56747 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CLDN6P56747 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLDN6P56747 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN6P56747 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN6P56747 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN6P56747 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLDN6P56747 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN6P56747 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLDN6P56747 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN6P56747 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN6P56747 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN6P56747 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN6P56747 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN6P56747 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN6P56747 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN6P56747 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN6P56747 LINC01225-203ENST00000563550 1244 ntBASIC16.32■□□□□ 0.2
CLDN6P56747 AC140878.1-201ENST00000565277 250 ntBASIC16.32■□□□□ 0.2
CLDN6P56747 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN6P56747 AL008721.1-201ENST00000609964 604 ntBASIC16.32■□□□□ 0.2
CLDN6P56747 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN6P56747 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN6P56747 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 AC018470.1-201ENST00000624790 3129 ntBASIC16.31■□□□□ 0.2
CLDN6P56747 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN6P56747 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms