Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGA2P52926 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.56■□□□□ 0.08
HMGA2P52926 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGA2P52926 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 AL020989.1-201ENST00000422979 469 ntBASIC15.56■□□□□ 0.08
HMGA2P52926 KRT18P57-201ENST00000443599 1254 ntBASIC15.56■□□□□ 0.08
HMGA2P52926 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGA2P52926 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.56■□□□□ 0.08
HMGA2P52926 VENTXP7-201ENST00000475503 772 ntBASIC15.56■□□□□ 0.08
HMGA2P52926 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
HMGA2P52926 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.56■□□□□ 0.08
HMGA2P52926 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.56■□□□□ 0.08
HMGA2P52926 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
HMGA2P52926 AP005901.3-202ENST00000581653 237 ntBASIC15.56■□□□□ 0.08
HMGA2P52926 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGA2P52926 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGA2P52926 AP000867.4-201ENST00000641616 219 ntBASIC15.56■□□□□ 0.08
HMGA2P52926 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
HMGA2P52926 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HMGA2P52926 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGA2P52926 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HMGA2P52926 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGA2P52926 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 AC008894.3-201ENST00000624324 3103 ntBASIC15.56■□□□□ 0.08
HMGA2P52926 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGA2P52926 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGA2P52926 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 AC148477.5-201ENST00000625164 1645 ntBASIC15.55■□□□□ 0.08
HMGA2P52926 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
HMGA2P52926 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGA2P52926 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGA2P52926 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGA2P52926 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGA2P52926 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGA2P52926 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.55■□□□□ 0.08
HMGA2P52926 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGA2P52926 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGA2P52926 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGA2P52926 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGA2P52926 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGA2P52926 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGA2P52926 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HMGA2P52926 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.54■□□□□ 0.08
HMGA2P52926 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HMGA2P52926 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGA2P52926 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGA2P52926 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
HMGA2P52926 SIGLEC16-201ENST00000599858 1437 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms